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Proceedings of the 22nd Python in Science Conference

SciPy 2023, Austin, Texas July 10 - July 16

Accepted Papers

Using Blosc2 NDim As A Fast Explorer Of The Milky Way (Or Any Other NDim Dataset)

Project Blosc, Francesc Alted, Marta Iborra, Oscar Guiñón, David Ibáñez, Sergio Barrachina

doi: 10.25080/gerudo-f2bc6f59-000, pages: 1-7

Python Array API Standard: Toward Array Interoperability in the Scientific Python Ecosystem

Aaron Meurer, Athan Reines, Ralf Gommers, Yao-Lung Fang, John Kirkham, Matthew Barber, Stephan Hoyer, Andreas Müller, Sheng Zha, Saul Shanabrook, Stephannie Gacha, Mario Lezcano-Casado, Thomas Fan, Tyler Reddy, Alexandre Passos, Hyukjin Kwon, Travis Oliphant, Consortium Standards

doi: 10.25080/gerudo-f2bc6f59-001, pages: 8-17

A Modified Strassen Algorithm to Accelerate Numpy Large Matrix Multiplication with Integer Entries

Anthony Breitzman

doi: 10.25080/gerudo-f2bc6f59-002, pages: 18-23

An Accessible Python based Author Identification Process

Anthony Breitzman

doi: 10.25080/gerudo-f2bc6f59-003, pages: 24-31

Biomolecular Crystallographic Computing with Jupyter

Blaine Mooers

doi: 10.25080/gerudo-f2bc6f59-004, pages: 32-39

Bayesian Statistics with Python, No Resampling Necessary

Charles Lindsey

doi: 10.25080/gerudo-f2bc6f59-005, pages: 40-45

Using Numba for GPU acceleration of Neutron Beamline Digital Twins

Coleman Kendrick, Jiao Lin, Garrett Granroth

doi: 10.25080/gerudo-f2bc6f59-006, pages: 46-52

EEG-to-fMRI Neuroimaging Cross Modal Synthesis in Python

David Calhas

doi: 10.25080/gerudo-f2bc6f59-007, pages: 53-58

vak: a neural network framework for researchers studying animal acoustic communication

David Nicholson, Yarden Cohen

doi: 10.25080/gerudo-f2bc6f59-008, pages: 59-67

Emukit: A Python toolkit for decision making under uncertainty

Andrei Paleyes, Maren Mahsereci, Neil Lawrence

doi: 10.25080/gerudo-f2bc6f59-009, pages: 68-75

MDAKits: A Framework for FAIR-Compliant Molecular Simulation Analysis

Irfan Alibay, Lily Wang, Fiona Naughton, Ian Kenney, Jonathan Barnoud, Richard Gowers, Oliver Beckstein

doi: 10.25080/gerudo-f2bc6f59-00a, pages: 76-84

The Pandata Scalable Open-Source Analysis Stack

James Bednar, Martin Durant

doi: 10.25080/gerudo-f2bc6f59-00b, pages: 85-92

Spatial Microsimulation and Activity Allocation in Python: An Update on the Likeness Toolkit

Joseph Tuccillo, James Gaboardi

doi: 10.25080/gerudo-f2bc6f59-00c, pages: 93-100

itk-elastix: Medical image registration in Python

Konstantinos Ntatsis, Niels Dekker, Viktor van der Valk, Tom Birdsong, Dženan Zukić, Stefan Klein, Marius Staring, Matthew McCormick

doi: 10.25080/gerudo-f2bc6f59-00d, pages: 101-105

PyQtGraph - High Performance Visualization for All Platforms

Ognyan Moore, Nathan Jessurun, Martin Chase, Nils Nemitz, Luke Campagnola

doi: 10.25080/gerudo-f2bc6f59-00e, pages: 106-113

aPhyloGeo-Covid: A Web Interface for Reproducible Phylogeographic Analysis of SARS-CoV-2 Variation using Neo4j and Snakemake

Wanlin Li, Nadia Tahiri

doi: 10.25080/gerudo-f2bc6f59-00f, pages: 114-123

Pandera: Going Beyond Pandas Data Validation

Niels Bantilan

doi: 10.25080/gerudo-f2bc6f59-010, pages: 124-129

libyt: a Tool for Parallel In Situ Analysis with yt

Shin-Rong Tsai, Hsi-Yu Schive, Matthew Turk

doi: 10.25080/gerudo-f2bc6f59-011, pages: 130-135

Data Reduction Network

Haoyin Xu, Haw-minn Lu, José Unpingco

doi: 10.25080/gerudo-f2bc6f59-012, pages: 136-142